Software Tools

We have many tools and all of them are available on the following links:


vizER is a platform that enables the visualisation of individual genes for evidence of reannotation (full publication: here). Complete, annotation-agnostic transcriptome definitions for 41 GTEx tissues can be also downloaded via the vizER webpage. The primary aim of vizER is to facilitate more accurate interpretation of variants and therefore, improve genetic diagnosis.

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CoExp is a framework for the generation, deployment, sharing and exploitation of co-expression networks as annotation models of genes and their role in transcription. It is a family of R packages that you can separately download from GitHub, but also a Web page in which all models available can be accessed and used for your own research.

Published on GitHub

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